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ONTOLOGY REPORT - ANNOTATIONS

Term:catalytic step 2 spliceosome
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Accession:GO:0071013 term browser browse the term
Definition:A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs.
Synonyms:narrow_synonym: mammalian spliceosomal complex C;   mammalian spliceosomal complex C1;   yeast spliceosomal complex A2-2

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catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624801:10,734,392...10,738,191
Ensembl chrNW_004624801:10,733,907...10,738,124 		JBrowse link
G Aqr aquarius intron-binding spliceosomal factor part_of IEA TreeGrafter
UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624804:2,080,295...2,172,643
Ensembl chrNW_004624804:2,083,341...2,173,208 		JBrowse link
G Bcas2 BCAS2 pre-mRNA processing factor part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:10,210,505...10,224,705
Ensembl chrNW_004624772:10,214,000...10,224,712 		JBrowse link
G Cactin cactin, spliceosome C complex subunit part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Cdc40 cell division cycle 40 part_of IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624916:1,302,294...1,353,487
Ensembl chrNW_004624916:1,302,420...1,352,986 		JBrowse link
G Cdc5l cell division cycle 5 like part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:15,477,188...15,517,656
Ensembl chrNW_004624754:15,477,193...15,517,636 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624741:20,565,686...20,581,708
Ensembl chrNW_004624741:20,564,474...20,581,716 		JBrowse link
G Cwc15 CWC15 spliceosome associated protein homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:39,629,120...39,640,059
Ensembl chrNW_004624735:39,626,956...39,663,347 		JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624844:1,787,668...1,846,167
Ensembl chrNW_004624844:1,785,775...1,846,608 		JBrowse link
G Cwc27 CWC27 spliceosome associated cyclophilin part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624815:4,863,902...5,082,308
Ensembl chrNW_004624815:4,863,908...5,082,347 		JBrowse link
G Ddx23 DEAD-box helicase 23 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624816:3,320,218...3,334,198
Ensembl chrNW_004624816:3,320,065...3,334,559 		JBrowse link
G Ddx41 DEAD-box helicase 41 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:12,571,208...12,576,721
Ensembl chrNW_004624733:12,570,402...12,578,019 		JBrowse link
G Ddx5 DEAD-box helicase 5 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624870:206,714...214,264
Ensembl chrNW_004624870:204,671...214,156 		JBrowse link
G Dhx16 DEAH-box helicase 16 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856 		JBrowse link
G Dhx35 DEAH-box helicase 35 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:662,875...734,201
Ensembl chrNW_004624842:664,031...748,166 		JBrowse link
G Dhx38 DEAH-box helicase 38 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624746:14,301,921...14,319,649
Ensembl chrNW_004624746:14,301,922...14,337,152 		JBrowse link
G Dhx8 DEAH-box helicase 8 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,092,040...1,117,888
Ensembl chrNW_004624795:1,092,040...1,117,859 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:407,228...435,578
Ensembl chrNW_004624795:407,598...438,734 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624801:9,240,780...9,250,864
Ensembl chrNW_004624801:9,240,780...9,250,863 		JBrowse link
G Ess2 ess-2 splicing factor homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624945:176,773...187,586
Ensembl chrNW_004624945:176,678...188,040 		JBrowse link
G Frg1 FSHD region gene 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:21,068,817...21,088,723
Ensembl chrNW_004624769:21,068,814...21,088,728 		JBrowse link
G Gpatch1 G-patch domain containing 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624832:7,042,401...7,079,554
Ensembl chrNW_004624832:7,042,790...7,079,688 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066 		JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624787:14,341,133...14,352,152
Ensembl chrNW_004624787:14,341,250...14,346,316 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624825:7,198,387...7,276,936
Ensembl chrNW_004624825:7,205,292...7,276,889 		JBrowse link
G Hnrnpf heterogeneous nuclear ribonucleoprotein F part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624922:555,345...571,586
Ensembl chrNW_004624922:471,853...571,678 		JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624733:42,538,286...42,547,911
Ensembl chrNW_004624733:42,538,159...42,548,249 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624828:1,199,048...1,250,887 JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624764:7,956,789...7,992,449
Ensembl chrNW_004624764:7,957,395...7,992,398 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Ilf2 interleukin enhancer binding factor 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:3,483,385...3,490,157
Ensembl chrNW_004624885:3,483,462...3,493,805 		JBrowse link
G Isy1 ISY1 splicing factor homolog part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624943:968,193...984,683 JBrowse link
G LOC101697838 small nuclear ribonucleoprotein-associated protein N part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624835:6,385,109...6,385,942 JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:24,425,503...24,429,916
Ensembl chrNW_004624754:24,425,463...24,429,916 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624872:1,428,885...1,438,633
Ensembl chrNW_004624872:1,428,073...1,438,563 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,576,672...6,584,303
Ensembl chrNW_004624828:6,576,708...6,584,303 		JBrowse link
G Magoh mago homolog, exon junction complex subunit part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624934:1,223,264...1,234,538 JBrowse link
G Magohb mago homolog B, exon junction complex subunit part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:27,280,411...27,288,292
Ensembl chrNW_004624752:27,280,407...27,288,260 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:3,868,759...3,965,446
Ensembl chrNW_004624759:3,868,662...3,965,319 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:12,098,386...12,151,635
Ensembl chrNW_004624734:12,098,361...12,148,760 		JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624763:7,552,541...7,568,047
Ensembl chrNW_004624763:7,550,307...7,567,918 		JBrowse link
G Phf5a PHD finger protein 5A part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:7,114,239...7,123,706
Ensembl chrNW_004624752:7,114,274...7,123,706 		JBrowse link
G Plrg1 pleiotropic regulator 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624858:5,801,884...5,818,005 JBrowse link
G Pnn pinin, desmosome associated protein part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624813:8,620,089...8,627,964
Ensembl chrNW_004624813:8,620,174...8,626,886 		JBrowse link
G Ppie peptidylprolyl isomerase E part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624764:22,222,103...22,237,113
Ensembl chrNW_004624764:22,222,047...22,237,113 		JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624754:20,976,765...20,985,408
Ensembl chrNW_004624754:20,976,515...20,985,393 		JBrowse link
G Ppil2 peptidylprolyl isomerase like 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:1,221,703...1,248,398
Ensembl chrNW_004624747:1,221,631...1,248,391 		JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624889:283,570...294,949
Ensembl chrNW_004624889:286,039...293,755 		JBrowse link
G Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:4,290,852...4,311,831
Ensembl chrNW_004624815:4,290,852...4,311,917 		JBrowse link
G Prp4k pre-mRNA processing factor kinase PRP4K part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624756:21,038,438...21,082,607 JBrowse link
G Prpf19 pre-mRNA processing factor 19 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624926:268,965...274,634
Ensembl chrNW_004624926:266,159...274,529 		JBrowse link
G Prpf6 pre-mRNA processing factor 6 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:29,601,050...29,664,054
Ensembl chrNW_004624741:29,601,047...29,664,054 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 part_of IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624786:4,356,481...4,392,594
Ensembl chrNW_004624786:4,355,993...4,393,243 		JBrowse link
G Puf60 poly(U) binding splicing factor 60 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:12,983,106...12,996,578
Ensembl chrNW_004624735:12,983,111...12,996,576 		JBrowse link
G Raly RALY heterogeneous nuclear ribonucleoprotein part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624842:5,237,571...5,315,619 JBrowse link
G Rbm22 RNA binding motif protein 22 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624774:9,935,701...9,946,422
Ensembl chrNW_004624774:9,935,704...9,946,472 		JBrowse link
G Rbm8a RNA binding motif protein 8A part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624772:17,286,950...17,289,143
Ensembl chrNW_004624772:17,286,957...17,295,135 		JBrowse link
G Rbmx RNA binding motif protein X-linked part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624808:10,176,695...10,185,847
Ensembl chrNW_004624808:10,176,293...10,182,079 		JBrowse link
G Rbmx2 RNA binding motif protein X-linked 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:9,679,066...9,689,943
Ensembl chrNW_004624797:9,679,171...9,690,066 		JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624767:20,456,951...20,466,994
Ensembl chrNW_004624767:20,456,890...20,467,641 		JBrowse link
G Sf3a1 splicing factor 3a subunit 1 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624747:6,654,656...6,679,525
Ensembl chrNW_004624747:6,655,037...6,679,640 		JBrowse link
G Sf3a2 splicing factor 3a subunit 2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624828:6,638,546...6,646,529
Ensembl chrNW_004624828:6,638,660...6,644,788 		JBrowse link
G Sf3a3 splicing factor 3a subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:20,615,963...20,639,005
Ensembl chrNW_004624764:20,615,830...20,639,005 		JBrowse link
G Sf3b1 splicing factor 3b subunit 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624889:2,796,351...2,835,592 JBrowse link
G Sf3b2 splicing factor 3b subunit 2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624767:20,326,499...20,340,204
Ensembl chrNW_004624767:20,326,499...20,340,164 		JBrowse link
G Sf3b3 splicing factor 3b subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:12,747,346...12,793,639
Ensembl chrNW_004624746:12,747,382...12,793,643 		JBrowse link
G Slu7 SLU7 homolog, splicing factor part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:29,147,329...29,161,687
Ensembl chrNW_004624733:29,146,579...29,162,074 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:2,351,476...2,378,047
Ensembl chrNW_004624749:2,351,373...2,378,159 		JBrowse link
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:14,620,494...14,649,768
Ensembl chrNW_004624764:14,621,002...14,649,695 		JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:3,523,621...3,534,552
Ensembl chrNW_004624768:3,523,719...3,535,195 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:3,694,488...3,703,169
Ensembl chrNW_004624741:3,691,676...3,703,255 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624741:17,892,908...17,902,321
Ensembl chrNW_004624741:17,892,964...17,902,321 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:10,134,623...10,147,342
Ensembl chrNW_004624770:10,135,425...10,147,298 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:7,488,259...7,495,305
Ensembl chrNW_004624832:7,488,674...7,495,306 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:9,973,949...9,987,520
Ensembl chrNW_004624747:9,962,467...9,987,511 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624807:7,079,944...7,086,973
Ensembl chrNW_004624807:7,079,090...7,087,215 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:11,430,311...11,436,223
Ensembl chrNW_004624750:11,430,311...11,436,204 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:3,157,769...3,164,084
Ensembl chrNW_004624762:3,157,796...3,164,084 		JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:70,186...75,496
Ensembl chrNW_004624768:70,186...75,427 		JBrowse link
G Snw1 SNW domain containing 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:24,161,974...24,191,943
Ensembl chrNW_004624734:24,161,662...24,191,937 		JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624764:9,010,440...9,043,277
Ensembl chrNW_004624764:9,010,499...9,042,579 		JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624824:594,203...613,225
Ensembl chrNW_004624824:594,790...609,750 		JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:9,464,487...9,479,714
Ensembl chrNW_004624764:9,463,586...9,479,786 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923 		JBrowse link
G Tfip11 tuftelin interacting protein 11 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:3,041,769...3,055,751
Ensembl chrNW_004624747:3,041,769...3,055,726 		JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624745:27,647,672...27,660,599
Ensembl chrNW_004624745:27,647,597...27,660,809 		JBrowse link
G Wdr83 WD repeat domain 83 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624901:310,709...315,302
Ensembl chrNW_004624901:310,709...315,054 		JBrowse link
G Xab2 XPA binding protein 2 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:704,400...711,963
Ensembl chrNW_004624828:704,300...712,251 		JBrowse link
G Zcchc8 zinc finger CCHC-type containing 8 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chrNW_004624747:22,615,310...22,639,076 JBrowse link
U2-type catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqr aquarius intron-binding spliceosomal factor part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624804:2,080,295...2,172,643
Ensembl chrNW_004624804:2,083,341...2,173,208 		JBrowse link
G Bcas2 BCAS2 pre-mRNA processing factor part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624772:10,210,505...10,224,705
Ensembl chrNW_004624772:10,214,000...10,224,712 		JBrowse link
G Bud31 BUD31 homolog part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624740:32,833,010...32,841,018
Ensembl chrNW_004624740:32,833,370...32,841,018 		JBrowse link
G Cdc40 cell division cycle 40 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624916:1,302,294...1,353,487
Ensembl chrNW_004624916:1,302,420...1,352,986 		JBrowse link
G Cdc5l cell division cycle 5 like part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:15,477,188...15,517,656
Ensembl chrNW_004624754:15,477,193...15,517,636 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:20,565,686...20,581,708
Ensembl chrNW_004624741:20,564,474...20,581,716 		JBrowse link
G Cwc15 CWC15 spliceosome associated protein homolog part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624735:39,629,120...39,640,059
Ensembl chrNW_004624735:39,626,956...39,663,347 		JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624844:1,787,668...1,846,167
Ensembl chrNW_004624844:1,785,775...1,846,608 		JBrowse link
G Dhx8 DEAH-box helicase 8 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624795:1,092,040...1,117,888
Ensembl chrNW_004624795:1,092,040...1,117,859 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624795:407,228...435,578
Ensembl chrNW_004624795:407,598...438,734 		JBrowse link
G Plrg1 pleiotropic regulator 1 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624858:5,801,884...5,818,005 JBrowse link
G Ppie peptidylprolyl isomerase E part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624764:22,222,103...22,237,113
Ensembl chrNW_004624764:22,222,047...22,237,113 		JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:20,976,765...20,985,408
Ensembl chrNW_004624754:20,976,515...20,985,393 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624926:268,965...274,634
Ensembl chrNW_004624926:266,159...274,529 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:4,356,481...4,392,594
Ensembl chrNW_004624786:4,355,993...4,393,243 		JBrowse link
G Rbm22 RNA binding motif protein 22 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:9,935,701...9,946,422
Ensembl chrNW_004624774:9,935,704...9,946,472 		JBrowse link
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624764:14,620,494...14,649,768
Ensembl chrNW_004624764:14,621,002...14,649,695 		JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:3,523,621...3,534,552
Ensembl chrNW_004624768:3,523,719...3,535,195 		JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624741:3,694,488...3,703,169
Ensembl chrNW_004624741:3,691,676...3,703,255 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624741:17,892,908...17,902,321
Ensembl chrNW_004624741:17,892,964...17,902,321 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624770:10,134,623...10,147,342
Ensembl chrNW_004624770:10,135,425...10,147,298 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624832:7,488,259...7,495,305
Ensembl chrNW_004624832:7,488,674...7,495,306 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624747:9,973,949...9,987,520
Ensembl chrNW_004624747:9,962,467...9,987,511 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624807:7,079,944...7,086,973
Ensembl chrNW_004624807:7,079,090...7,087,215 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624750:11,430,311...11,436,223
Ensembl chrNW_004624750:11,430,311...11,436,204 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624762:3,157,769...3,164,084
Ensembl chrNW_004624762:3,157,796...3,164,084 		JBrowse link
G Snw1 SNW domain containing 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:24,161,974...24,191,943
Ensembl chrNW_004624734:24,161,662...24,191,937 		JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624824:594,203...613,225
Ensembl chrNW_004624824:594,790...609,750 		JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chrNW_004624764:9,464,487...9,479,714
Ensembl chrNW_004624764:9,463,586...9,479,786 		JBrowse link
G Xab2 XPA binding protein 2 part_of IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624828:704,400...711,963
Ensembl chrNW_004624828:704,300...712,251 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15721
    protein-containing complex 5352
      catalytic complex 1622
        catalytic step 2 spliceosome 92
          U12-type catalytic step 2 spliceosome 0
          U2-type catalytic step 2 spliceosome 30
Path 2
Term Annotations click to browse term
  cellular_component 15721
    cellular anatomical entity 15624
      organelle 11370
        membrane-bounded organelle 10395
          intracellular membrane-bounded organelle 9903
            nucleus 6082
              nuclear protein-containing complex 1158
                spliceosomal complex 186
                  catalytic step 2 spliceosome 92
                    U12-type catalytic step 2 spliceosome 0
                    U2-type catalytic step 2 spliceosome 30
paths to the root